RSNA 2014 

Abstract Archives of the RSNA, 2014


SSJ14-05

Transcriptomic and Immunohistochemical Profiling of Pancreatic Ductal Adenocarcinoma: Search for Functional Imaging Biomarkers

Scientific Papers

Presented on December 2, 2014
Presented as part of SSJ14: Molecular Imaging (GI/Liver)

Participants

Stephanie Kay Carlson MD, Presenter: Royalties, Medspira, LLC
Alan Penheiter PhD, Abstract Co-Author: Nothing to Disclose
Claire E. Bender MD, Abstract Co-Author: Nothing to Disclose
Sibel Erdogan, Abstract Co-Author: Nothing to Disclose
Stephen J. Murphy PhD, Abstract Co-Author: Nothing to Disclose
Steven N. Hart PhD, Abstract Co-Author: Nothing to Disclose
Joema Felipe Lima, Abstract Co-Author: Nothing to Disclose
Fariborz (Fred) Rakhshan Rohakhtar, Abstract Co-Author: Nothing to Disclose
Daniel R. O'Brien, Abstract Co-Author: Nothing to Disclose
William Bamlet MS, Abstract Co-Author: Nothing to Disclose
Ryan E. Wuertz, Abstract Co-Author: Nothing to Disclose
Thomas C. Smyrk, Abstract Co-Author: Nothing to Disclose
Fergus J. Couch PhD, Abstract Co-Author: Nothing to Disclose
George Vasmatzis PhD, Abstract Co-Author: Nothing to Disclose

PURPOSE

Imaging plays an important role in the management of patients with pancreatic ductal adenocarcinoma (PDAC); however, the ability to reliably detect early stage tumors and accurately identify the true extent of disease preoperatively is severely limited with current anatomical diagnostic imaging techniques (computed tomography, magnetic resonance imaging, endoscopic ultrasound). We employed a target-centric strategy to identify transporter proteins upregulated in PDAC versus normal pancreas as potential targets for a new functional imaging probe to complement existing anatomical imaging approaches.

METHOD AND MATERIALS

We have performed transcriptomic (gene expression) profiling using laser capture microdissection, microarray and RNAseq on histologically-confirmed primary PDAC tumors and normal pancreas tissue from 33 patients, including five patients whose tumors were isoattenuating to normal pancreas and not visible on CT. RNAseq data were analyzed as gene normalized counts using the mapped reads per kilobase per million mapped reads (RPKM) method. Target expression at the protein level was confirmed with immunohistochemistry on tissue microarrays from 94 PDAC patients. All studies on human specimens were approved by our Institutional Review Board.

RESULTS

Our search has identified at least 10 candidate transporter proteins upregulated in PDAC versus normal pancreas. Thus far, the best potential imaging target identified was SLC6A14, a neutral and basic amino acid transporter. SLC6A14 was overexpressed at the transcriptional level in all patients and expressed at the protein level in 95% of PDAC tumors.

CONCLUSION

SLC6A14 merits further investigation as a candidate transporter for functional imaging of PDAC.

CLINICAL RELEVANCE/APPLICATION

A new functional imaging probe that selectively targets PDAC with high sensitivity could transform patient management by allowing earlier detection and surgical intervention, and improving preoperative staging of disease.

Cite This Abstract

Carlson, S, Penheiter, A, Bender, C, Erdogan, S, Murphy, S, Hart, S, Lima, J, Rohakhtar, F, O'Brien, D, Bamlet, W, Wuertz, R, Smyrk, T, Couch, F, Vasmatzis, G, Transcriptomic and Immunohistochemical Profiling of Pancreatic Ductal Adenocarcinoma: Search for Functional Imaging Biomarkers.  Radiological Society of North America 2014 Scientific Assembly and Annual Meeting, - ,Chicago IL. http://archive.rsna.org/2014/14006767.html